Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs143921660 | chr19:42515669 | C/T | 0.000314 | 214 | 15.1 | 17 | 11.2 | KM Plot |
| KIRP | rs143929791 | chr3:100011993 | ATTTT/A | 4.46E-5 | 210 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs144007305 | chr14:59858038 | CT/C | 0.00024 | 209 | 14.68 | 19.4 | 6.63 | KM Plot |
| KIRP | rs144051709 | chr10:63451584 | T/C | 0 | 213 | 18.02 | 6.83 | 3.38 | KM Plot |
| KIRP | rs144397507 | chr22:28811816 | GC/G | 4.97E-5 | 212 | 15.07 | 20.27 | 11.77 | KM Plot |
| KIRP | rs144534303 | chr10:102011330 | G/A | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs144897437 | chr11:34780968 | G/GAGAGAATT | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs144959093 | chr17:80683912 | C/T | 3.51E-6 | 205 | 16.43 | 16.13 | 15.15 | KM Plot |
| KIRP | rs144969912 | chr6:27616843 | C/T | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs145206182 | chr10:63486582 | A/AG | 0 | 213 | 18.03 | 9.65 | 3.38 | KM Plot |
| KIRP | rs145350667 | chr8:30086753 | A/T | 9.77E-7 | 211 | 15.33 | 18.03 | 0.33 | KM Plot |
| KIRP | rs145370898 | chr17:80793293 | ATTTC/A | 4.19E-5 | 209 | 15.33 | 17.6 | 15.15 | KM Plot |
| KIRP | rs145380650 | chr5:79922349 | C/A | 4.44E-5 | 211 | 18.65 | 14.4 | 9.77 | KM Plot |
| KIRP | rs1456282 | chr10:63394596 | A/G | 0 | 214 | 18.03 | 8.07 | 1.17 | KM Plot |
| KIRP | rs145677553 | chr15:24504685 | ACT/A | 0.000235 | 204 | 16.97 | 13.23 | 9.48 | KM Plot |